Aging & Longevity

Deep aging clocks: AI-powered strategies for biological age estimation

1 month 2 weeks ago
Several strategies have emerged lately in response to the rapid increase in the aging population to enhance health and life span and manage aging challenges. Developing such strategies is imperative and requires an assessment of biological aging. Several aging clocks have recently been developed to measure biological aging and to assess the efficacy of longevity interventions. Biological age better reflects a person's actual age and is closely associated with health outcomes and time to...
Luma Srour

ScisTree2 enables large-scale inference of cell lineage trees and genotype calling using efficient local search

1 month 2 weeks ago
In a multicellular organism, cell lineages share a common evolutionary history. Knowing this history can facilitate the study of development, aging, and cancer. Cell lineage trees represent the evolutionary history of cells sampled from an organism. Recent developments in single-cell sequencing have greatly facilitated the inference of cell lineage trees. However, single-cell data are sparse and noisy, and the size of single-cell data is increasing rapidly. Accurate inference of cell lineage...
Haotian Zhang

Single-cell transcriptomic and genomic changes in the ageing human brain

1 month 2 weeks ago
Over time, cells in the brain and in the body accumulate damage, which contributes to the ageing process¹. In the human brain, the prefrontal cortex undergoes age-related changes that can affect cognitive functioning later in life². Here, using single-nucleus RNA sequencing (snRNA-seq), single-cell whole-genome sequencing (scWGS) and spatial transcriptomics, we identify gene-expression and genomic changes in the human prefrontal cortex across lifespan, from infancy to centenarian. snRNA-seq...
Ailsa M Jeffries

Nutritional co-therapy with vitamin D and L-theanine reduces unpredictable mild chronic stress (UCMS) in aged mice by restoring alpha-oscillations, dopamine levels and behavioral improvement

1 month 2 weeks ago
Late-life depression (LLD) arises from the confluence of neurochemical dysfunction, oxidative stress, and neural network disintegration, presenting a formidable therapeutic challenge. Here, we demonstrated that combined vitamin D (Vit D) and L-theanine (L-thea) administration exerts multimodal neurorestorative effects in an aged murine model of unpredictable chronic mild stress (UCMS), addressing the core triad of LLD pathology: dopaminergic decline, redox imbalance, and thalamocortical...
Hafiza Khushbakht Hussain

Validity of repetitions in reserve for prescribing resistance exercise in older adults

1 month 2 weeks ago
We aimed to assess the validity of predicted repetitions in reserve (RIR) during resistance exercise (RE) in community-dwelling older adults (n = 25; 68 ± 4 yrs.; body mass index [BMI] = 28.1 ± 4.6 kg·m^(-2)). Prior to data collection, participants were familiarized with resistance training as well as with the use of RIR and rating of perceived exertion (RPE). Participants completed a one-repetition maximum (1RM) test in the chest press exercise. The repetitions-to-failure test, used to...
Paola Gómez-Redondo

Robust and adaptive non-parametric tests for detecting general distributional shifts in gene expression

1 month 2 weeks ago
Differential expression analysis is crucial in genomics, yet most methods focus only on mean shifts. Variance shifts in gene expression-especially in cellular signaling and aging-are increasingly recognized as being biologically important. We present QRscore (quantile rank score), a general non-parametric framework that extends the Mann-Whitney test to detect both mean and variance shifts through model-informed weights derived from negative binomial (NB) and zero-inflated NB (ZINB)...
Fanding Zhou

DNA2 enables growth by restricting recombination-restarted replication

1 month 2 weeks ago
Nuclease-helicase DNA2 is a multifunctional genome caretaker that is essential for cell proliferation in a range of organisms, from yeast to human^(1-4). Bi-allelic DNA2 mutations that reduce DNA2 concentrations cause a spectrum of primordial dwarfism disorders, including Seckel and Rothmund-Thomson-related syndromes^(5-7). By contrast, cancer cells frequently express high concentrations of DNA2 (refs. ^(8-11)). The mechanism that precludes cell proliferation in the absence of DNA2 and the...
Jessica J R Hudson

The aging factor EPS8 induces disease-related protein aggregation through RAC signaling hyperactivation

1 month 2 weeks ago
Aging is a major risk factor for neurodegenerative diseases associated with protein aggregation, including Huntington's disease and amyotrophic lateral sclerosis (ALS). Although these diseases involve different aggregation-prone proteins, their common late onset suggests a link to converging changes resulting from aging. In this study, we found that age-associated hyperactivation of EPS8/RAC signaling in Caenorhabditis elegans promotes the pathological aggregation of Huntington's disease-related...
Seda Koyuncu

The associations between playing a musical instrument and grey matter in older adults at risk for dementia: a whole-brain VBM analysis

1 month 2 weeks ago
While research suggests that playing musical instruments promotes neuroplasticity in professional musicians, it remains unclear whether lifelong music experience benefits brain health in non-professional musicians. This study examined whether playing a musical instrument across the lifespan is associated with (a) altered grey matter (GM) density and (b) neuropsychological functioning in older adults at risk for dementia. Sixty-one individuals aged ≥ 50 years were recruited from a memory clinic....
Nicole Espinosa

Age-related differences in the weighting of kinematic and contextual information during action prediction

1 month 2 weeks ago
INTRODUCTION: Predicting others' behaviors is an essential ability to interact efficiently within the social world. Previous evidence suggests that action prediction entails the integration of incoming sensory information with previous experience and contextual expectations. While it is well known that motor and cognitive functions face age-related changes, research examining how action prediction abilities evolve across the lifespan remains limited.
Elisa Ravizzotti

Glutamate-associated research in Parkinson's disease: a bibliometric analysis

1 month 2 weeks ago
CONCLUSION: Research on PD and glutamate focused on countries with increasing aging. The collaboration of different countries and institutions was conducive to promoting the development of this field. The research hotspots included basal ganglia, oxidative stress, DA, neurons, a-Syn, glutamate receptors, and synaptic plasticity. a-Syn and neuroinflammation may be research directions in the future.
Yan-Jun Chen

Accelerated midlife endocrine and bioenergetic brain aging in APOE4 females

1 month 2 weeks ago
Female sex, age, and APOE4 genotype are the greatest risk factors for Alzheimer's disease. Using a translational perimenopause mouse model based on human Stages of Reproductive Aging Works (STRAW) criteria, we investigated the impact of APOE genotype on female midlife endocrine aging, peripheral metabolic indicators, brain bioenergetic pathways, mitochondrial function, neuroimmune activation, and myelination. Compared to APOE3 females, APOE4 females exhibited accelerated endocrine aging that was...
Tian Wang

Selective targeting of TBXT with DARPins identifies regulatory networks and therapeutic vulnerabilities in chordoma

1 month 2 weeks ago
The embryonic transcription factor TBXT (brachyury) drives chordoma, a spinal neoplasm without effective drug therapies. TBXT's regulatory network is poorly understood, and strategies to disrupt its activity for therapeutic purposes are lacking. We developed designed ankyrin repeat proteins that block TBXT-DNA binding (T-DARPins). In chordoma cells, T-DARPins reduced cell cycle progression, spheroid formation, and tumor growth in mice and induced signs of senescence and differentiation....
Charles S Umbaugh

Deletion of sulfate transporter SUL1 extends yeast replicative lifespan via reduced PKA signaling instead of decreased sulfate uptake

1 month 2 weeks ago
The regulation of cellular metabolism and growth in response to nutrient availability is crucial for cell survival and can significantly impact on lifespan. Central to this regulation is a class of transporters that sense and transport specific nutrients and transduce the signal downstream to control genes responsible for growth and survival. In this study, we identified SUL1, a plasma membrane transporter responsible for regulating the entry of extracellular sulfate in Saccharomyces cerevisiae,...
Juan Long

Role of circadian CLOCK signaling in cellular senescence

1 month 2 weeks ago
The circadian rhythm is a key biological mechanism that aligns organisms' physiological processes with Earth's 24-h light-dark cycle, crucial for cellular and tissue homeostasis. Disruption of this system is linked to accelerated aging and age-related diseases. Central to circadian regulation is the CLOCK protein, which controls gene transcription related to tissue homeostasis, cellular senescence, and DNA repair. Research reveals CLOCK's dual role: in normal cells, it supports rejuvenation by...
Ziyou Yuan

UCHL1 alleviates nucleus pulposus cell senescence by promoting chaperone-mediated autophagy antagonizing autophagy-dependent ferroptosis through deubiquitination of HSPA8

1 month 2 weeks ago
Chaperone-mediated autophagy (CMA), a lysosome-dependent protein degradation pathway, plays a pivotal yet poorly understood role in cellular senescence-related degenerative diseases. Our study sheds light on a novel mechanism whereby UCHL1 plays a crucial role in mitigating nucleus pulposus cell (NPC) senescence and intervertebral disc degeneration (IVDD) by activating CMA to counteract autophagy-dependent ferroptosis. Through sequencing analysis of human samples, we identified UCHL1 as a...
Zhouwei Wu

GPR65 Functions as a Key Factor of Bone Aging and a Novel Therapeutic Target for Osteoporosis

1 month 2 weeks ago
Osteoporosis (OP) is a metabolic bone disease, characterized by loss of bone mass and destruction of bone microstructure, which has a high incidence of disability. Identification of the key factors of pathogenesis is essential for diagnosis and therapy. In this study, we have identified the proton-sensing receptor GPR65, which is specifically expressed in osteoclasts and is significantly down-expressed in osteoclast differentiation, aging, ovariectomy (OVX)-, and tail suspension (TS)-induced...
Kun Zhang
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